Theagle.cely.1.var
While the exact string "theagle.Cely.1.var" may be a specific user-defined variable in a local dataset or script, its "interesting features" are rooted in the EAGLE: Enhancer And Gene Learning Ensemble framework. Key Features of EAGLE Variables
: This often denotes cell-type specificity , a core feature of EAGLE which allows it to distinguish between interactions that only occur in certain tissues. theagle.Cely.1.var
: Likely refers to the EAGLE tool or its associated database, EnhancerAtlas . While the exact string "theagle
These track the number of other enhancers (EWS) or genes (GWS) located in the "window" between the enhancer and gene of interest, accounting for potential interference or competition. These track the number of other enhancers (EWS)
The physical distance between the enhancer and the gene's transcription start site.
Based on the gene's FPKM score (from RNA-seq data), representing the transcriptional activity level in specific tissues.